NeAT - graph-neighbours

Extract from a graph the neighbourhood of a set of seed nodes.
This program was developed by Sylvain Brohée and Jacques van Helden.
   Input format  

   Output format 

   Distance from seed node

Comment on the demonstration example

This demonstration graph consists in the yeast co-immunopreciptation interaction dataset described in Gavin et al (2006). It contains 1430 nodes and 6531 edges. We will look for the neighbours of some polypeptides to see if they are linked to other proteins of similar functions.


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Column specification (only relevant for tab-delimited input)
Source node
Target node
Weight or label column
Direction of the neighbourhood  

 Include each node in its neighborhood (with a distance of zero)

Seed node selection

All nodes
Node selection

Upload seed nodes from file :