RSAT - matrix-quality result

Analysis: matrix-quality result: CRP.RegulonDB2012 (21/03/2018 17:50)

matrix-quality result: LexA and CTCF matrices from RegulonDB 2015 CRP.RegulonDB2012

Command: matrix-quality  -v 0 -html_title ' LexA and CTCF matrices from RegulonDB 2015 ' -ms $RSAT/public_html/tmp/apache/2018/03/21/matrix-quality_2018-03-21.175002_zdBRpm/input_matrix -matrix_format transfac -pseudo 1 -seq LexA_peaks $RSAT/public_html/tmp/apache/2018/03/21/matrix-quality_2018-03-21.175002_zdBRpm/sequence1.fasta -seq_format fasta -plot LexA_peaks nwd -seq CRP_binding_sites $RSAT/public_html/tmp/apache/2018/03/21/matrix-quality_2018-03-21.175002_zdBRpm/sequence2.fasta -plot CRP_binding_sites nwd -perm LexA_peaks 1 -perm CRP_binding_sites 1 -bgfile $RSAT/public_html/data/genomes/Escherichia_coli_GCF_000005845.2_ASM584v2/oligo-frequencies/2nt_upstream-noorf_Escherichia_coli_GCF_000005845.2_ASM584v2-ovlp-1str.freq.gz -bg_format oligo-analysis -bg_pseudo 0.01 -archive -o $RSAT/public_html/tmp/apache/2018/03/21/matrix-quality_2018-03-21.175002_zdBRpm/matrix-quality_2018-03-21.175002

Figures

Matrix logo

Decreasing cumulative distributions (dCDF)

Decreasing cumulative distributions (dCDF), logarithmic Y axis

ROC curve (logarithmic X axis)

NWD curve

Matrix information

; convert-matrix  -v 1 -from transfac -i $RSAT/public_html/tmp/apache/2018/03/21/matrix-quality_2018-03-21.175002_zdBRpm/CRP.RegulonDB2012/matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_matrix.tf -to tab -o $RSAT/public_html/tmp/apache/2018/03/21/matrix-quality_2018-03-21.175002_zdBRpm/CRP.RegulonDB2012/matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_matrix_info.txt -bgfile $RSAT/public_html/tmp/apache/2018/03/21/matrix-quality_2018-03-21.175002_zdBRpm/matrix-quality_2018-03-21.1750022nt_upstream-noorf_Escherichia_coli_GCF_000005845.2_ASM584v2-ovlp-1str.freq.gz_inclusive.tab -bg_format inclusive -return counts,frequencies,weights,info,parameters,sites,logo -logo_format png -logo_opt '-e -M -t CRP.RegulonDB2012 ' -logo_file $RSAT/public_html/tmp/apache/2018/03/21/matrix-quality_2018-03-21.175002_zdBRpm/CRP.RegulonDB2012/matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_logo
; Input files
;	input	/space23/rsat/public_html/tmp/apache/2018/03/21/matrix-quality_2018-03-21.175002_zdBRpm/CRP.RegulonDB2012/matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_matrix.tf
;	prior	/space23/rsat/public_html/tmp/apache/2018/03/21/matrix-quality_2018-03-21.175002_zdBRpm/matrix-quality_2018-03-21.1750022nt_upstream-noorf_Escherichia_coli_GCF_000005845.2_ASM584v2-ovlp-1str.freq.gz_inclusive.tab
; Input format        	transfac
; Output files
;	output	/space23/rsat/public_html/tmp/apache/2018/03/21/matrix-quality_2018-03-21.175002_zdBRpm/CRP.RegulonDB2012/matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_matrix_info.txt
; Output format       	tab
; pseudo-weight       	1
; Background model
;	Strand        	undef
;	Background pseudo-frequency	0.01
;	Residue probabilities
;		a	0.29114
;		c	0.20781
;		g	0.20402
;		t	0.29702
A	110	37	37	26	34	192	63	67	52	112	50	129	18	25	231	22	190	86	90	71	51	57
C	43	39	16	48	5	32	47	83	71	32	77	37	15	221	2	224	13	60	19	22	34	41
G	27	23	146	18	195	18	45	41	47	57	79	41	15	12	15	6	41	20	0	20	16	50
T	80	161	61	168	26	18	105	69	90	59	54	53	212	2	12	8	16	94	151	147	159	112
//
A  0.4  0.1  0.1  0.1  0.1  0.7  0.2  0.3  0.2  0.4  0.2  0.5  0.1  0.1  0.9  0.1  0.7  0.3  0.3  0.3  0.2  0.2
C  0.2  0.2  0.1  0.2  0.0  0.1  0.2  0.3  0.3  0.1  0.3  0.1  0.1  0.8  0.0  0.9  0.1  0.2  0.1  0.1  0.1  0.2
G  0.1  0.1  0.6  0.1  0.7  0.1  0.2  0.2  0.2  0.2  0.3  0.2  0.1  0.0  0.1  0.0  0.2  0.1  0.0  0.1  0.1  0.2
T  0.3  0.6  0.2  0.6  0.1  0.1  0.4  0.3  0.3  0.2  0.2  0.2  0.8  0.0  0.0  0.0  0.1  0.4  0.6  0.6  0.6  0.4
//
A  0.4 -0.7 -0.7 -1.1 -0.8  0.9 -0.2 -0.1 -0.4  0.4 -0.4  0.5 -1.4 -1.1  1.1 -1.2  0.9  0.1  0.2 -0.1 -0.4 -0.3
C -0.2 -0.3 -1.2 -0.1 -2.3 -0.5 -0.1  0.4  0.3 -0.5  0.4 -0.4 -1.3  1.4 -3.2  1.4 -1.4  0.1 -1.0 -0.9 -0.5 -0.3
G -0.7 -0.8  1.0 -1.1  1.3 -1.1 -0.2 -0.3 -0.1  0.1  0.4 -0.3 -1.3 -1.5 -1.3 -2.1 -0.3 -1.0 -5.6 -1.0 -1.2 -0.1
T  0.0  0.7 -0.2  0.8 -1.1 -1.4  0.3 -0.1  0.2 -0.3 -0.4 -0.4  1.0 -3.5 -1.8 -2.2 -1.6  0.2  0.7  0.6  0.7  0.4
//
A  0.2 -0.1 -0.1 -0.1 -0.1  0.7 -0.0 -0.0 -0.1  0.2 -0.1  0.3 -0.1 -0.1  1.0 -0.1  0.7  0.0  0.1 -0.0 -0.1 -0.1
C -0.0 -0.0 -0.1 -0.0 -0.0 -0.1 -0.0  0.1  0.1 -0.1  0.1 -0.1 -0.1  1.2 -0.0  1.2 -0.1  0.0 -0.1 -0.1 -0.1 -0.0
G -0.1 -0.1  0.6 -0.1  1.0 -0.1 -0.0 -0.0 -0.0  0.0  0.1 -0.0 -0.1 -0.1 -0.1 -0.1 -0.0 -0.1 -0.0 -0.1 -0.1 -0.0
T  0.0  0.5 -0.1  0.5 -0.1 -0.1  0.1 -0.0  0.1 -0.1 -0.1 -0.1  0.8 -0.0 -0.1 -0.1 -0.1  0.1  0.4  0.4  0.4  0.2
//
; Sites	260
>site_0
ATGTGATTCATATCACATATTT
>site_1
CTGTGATTGGTATCACATTTTT
>site_2
ATGTGATCCAGATCACATCTAT
>site_3
ATCTGACTCACATCACACTTTT
>site_4
ATGTTATCCACATCACAATTTC
>site_5
ATTTGATACCCATCACACTTTC
>site_6
ATGTGATTTTCATCACGATTTA
>site_7
ATGTGATTAACAGCACATTTTT
>site_8
ATGTGAGTAGTGTCACATTTTT
>site_9
ATGTGATTTGCTTCACATCTTT
>site_10
GTGTGAAGTTGATCACAAATTT
>site_11
ATGTGATACAAATCACATAAAT
>site_12
GTGTGATCGTCATCACAATTCG
>site_13
ATGAGATTTTCATCACACATTT
>site_14
AAGTGATTTAGATCACATAATA
>site_15
GTGTGATCTGCATCACGCATTA
>site_16
ATGTGTACGAAATCACATTTTT
>site_17
TTTTGACATGTATCACAAATTT
>site_18
TTGTGATTCAGATCACAAAGAT
>site_19
ACGTGATCTTCATCACAAATAA
>site_20
TCGTGATCAAGATCACATTCTC
>site_21
ACGTGATGATGTTCACAATTTG
>site_22
ATTTGAAGTAGCTCACACTTAT
>site_23
ATTTGATTTAGATCGCAATTTG
>site_24
TTGTGATTCGATTCACATTTAA
>site_25
ATGTGATTGATATCACACAAAA
>site_26
ATGCGATTCCACTCACAATATT
>site_27
AAGTGACCGAAATCACACTTAA
>site_28
ATGAGATTCAGATCACATATAA
>site_29
GAGTGACGTAGATCACACTTAT
>site_30
CTTCGATACACATCACAATTAA
>site_31
ATTTGAAGTTCATCACACTTCA
>site_32
CGGTGATCTATTTCACAAATTA
>site_33
ATGCGATCTATATCACGCTGTG
>site_34
ATTTGTTCCTCTTCACATTTTT
>site_35
ATTTGCACGGCGTCACACTTTG
>site_36
ATGTGAAATAAATCAAAATTTC
>site_37
TAGTGATCCACGCCACATTTTG
>site_38
TTGCGATCAAAATAACACTTTT
>site_39
TTGTGAATCTTTTCACAGTTTA
>site_40
ATTCAATATTCATCACACTTTT
>site_41
AAGTGATGCAAATCACATAAAT
>site_42
TCGTGAACTACGGCACACTTTG
>site_43
TTATGACCCTCTTCACATTTCG
>site_44
GTGTGATGCAAGCCACATTTTT
>site_45
ATGTGAGCGAGATCAAATTCTA
>site_46
ACGTGACGTTCATCACAAAACG
>site_47
ATGTGAATTGCCGCACACATTA
>site_48
ATGTGAGTTAGCTCACTCATTA
>site_49
AGGTGAGATGCATCACGCTTCG
>site_50
AGGTGACCGGTTTCACAAATAT
>site_51
CTGTGAGTGATTTCACAGTATC
>site_52
TTGTTATTAGTCTCACACTTTT
>site_53
GTGCGAGCCAGCTCAAACTTTT
>site_54
ATATGACGGCGGTCACACTTAT
>site_55
ATGCGATCTGGTTCAAATAATT
>site_56
TTTCGAGGTTGATCACATTTCC
>site_57
ATGTGCGACCACTCACAAATTA
>site_58
AGGTGAGAGCCATCACAAATGT
>site_59
ATGTGAGCCAGCTCACCATAAA
>site_60
ATGAGATCGAGCACACATTTTA
>site_61
ATGTGAAGCAAATCACCCACTT
>site_62
ATTTGAGTAAGTTCTCAATTTT
>site_63
TTGTGAGCTTGCTCGCACTTCG
>site_64
TTATGACGCTCTTCACACTCTG
>site_65
ATGCGCGACGCATCGCAAATTT
>site_66
ATATGACAACCATCACAAAAAT
>site_67
CTGTAACAGAGATCACACAAAG
>site_68
TAGTGAAGCAGATCGCATTATA
>site_69
TATTGTCCCCGATCACACTTTT
>site_70
CCATGATCCGCGCCACACTTTT
>site_71
CAGTGATCCAGGTCACGATAAC
>site_72
GTTAAATATAGATCACAATTTT
>site_73
TATAGATCTCCGTCACATTTTT
>site_74
ATGTGACTACCATCACTTTAAT
>site_75
TTGCGAAGCGCGTCACTATTTA
>site_76
ATATGACGGTGTTCACAAAGTT
>site_77
ATTTGCACTGTGTCACAATTCC
>site_78
TTGTGATCGTTATCTCGATATT
>site_79
TTGCAAGCAACATCACGAAATT
>site_80
GTGTTAAATTGATCACGTTTTA
>site_81
TTGCGAGCGAGCGCACACTTGT
>site_82
ATTTATTCCATGTCACACTTTT
>site_83
TAGAGATCTACTTCACAAATCA
>site_84
TTTTGCGCGAGGTCACTATTTT
>site_85
TTGCGGGTCGCGTCACATTTAA
>site_86
AGGTGATTTTGATCACGGAATA
>site_87
TTTTGAATCCCATCACAAACCC
>site_88
CTGTGGTTGCCATCACAGATAT
>site_89
TTGTGGCCTGCTTCAAACTTTC
>site_90
AAGTGAACCATATCTCAATTCA
>site_91
TTATGAAGCCCTTCACAGAATT
>site_92
GTGCGGGCGTGATCACAATTAC
>site_93
CTGTGACTCGATTCACGAAGTC
>site_94
ACGCGACTTTTATCACTTTTTA
>site_95
CGGTGACGGAGTTCACCCTTTA
>site_96
TTGCAATTCGTGTCACAAAATA
>site_97
TTACGACAGCTATCACGAATTT
>site_98
ATTTGAAGCAGTTAACGCTATT
>site_99
ACATGAGCAACCGCACATATTT
>site_100
CTGCGAGTGGGAGCACGGTTTT
>site_101
TTTTGCGCTAAAGCACATTTCT
>site_102
GTGCGAAATCCGTCACAGTTCA
>site_103
TTGTGATGTGGTTAACCAATTT
>site_104
TCGTGAACGATCCCACGAATTT
>site_105
CTGCGAGCATGGTCATATTTTT
>site_106
GAGTGATATGTATAACATTATG
>site_107
ATATGACCAACCTCTCATAATT
>site_108
ATGCAAAGGACGTCACATTACC
>site_109
GAGTGATCGAGTTAACATTGTT
>site_110
TGGTGAGGAACTTAACAATATT
>site_111
TTGAGATTCAACTCTCAAATTT
>site_112
TTGTGAATCAGATCAGAAAACC
>site_113
ATGTATGACAGATCACTATTTT
>site_114
ATATGATAAATATCAAACAATG
>site_115
ATGTAAGCTGTGCCACGTTTTT
>site_116
TTGTGAGTTTTGTCACCAAATA
>site_117
TTGCGATGAATGTCACATCCTC
>site_118
TTATGACGAGGCACACACATTT
>site_119
TTGAGGGGTTGATCACGTTTTG
>site_120
TGTTGCTTTTGATCACAATAAG
>site_121
TCGTGACAGGAATCACGGAGTT
>site_122
GCTTGAGCCGCAGCACAATGTG
>site_123
GTTTGACGGCTATCACGTTTCA
>site_124
ATTTAATTCGTATCGCAAATTA
>site_125
TGGTGATCCATAAAACAATATT
>site_126
CCGTGAAAGCGATCACAAAGGG
>site_127
TCGTGATACTCATCACCATGAC
>site_128
ATGTGATCTACAGCATGTTATG
>site_129
GCGTGCCAGTTTTCACATTCTT
>site_130
TCTTGCTTACCGTCACATTCTT
>site_131
CAGTGACAGATTTCACGAAAAT
>site_132
GGTTGCACTCTCTCACATTTTT
>site_133
GCCTGACGGAGTTCACACTTGT
>site_134
TCATGAAACTGTGCACATTTTA
>site_135
GCAGGATTTAGCTCACACTTAT
>site_136
ACGCAGCGAAGATCACAATTTA
>site_137
CATTTAAACAGATCACAAAATC
>site_138
TATTGATCTAACTCACGAAAAT
>site_139
TTACAAGGCACATCACGTTATG
>site_140
CTGTGACCGTGGTCGCAGTTGG
>site_141
TTGGAATATCCATCACATAACG
>site_142
ATATGCGCGAAATCAAACAATT
>site_143
GTGCGAGTCTGCTCGCATAATC
>site_144
ATGTGACAGATAAAACGTTTTA
>site_145
AATTGACCGATGCCACGTTTTG
>site_146
ATATGTTTCGTTTCACAGTTCT
>site_147
ATGTGCGCATCTCCACATTACC
>site_148
ATGTTAATTTCCTCACATCGTG
>site_149
ATGCGGTGAGCATCACATCACC
>site_150
ACGAGATCTGACACACACTATA
>site_151
CAGCGACATCTGTCACATTCCT
>site_152
TTGGGCGACAGATCACGCAAAA
>site_153
TTTTGAATCGTGTCTCATTCTG
>site_154
GTGAGGCATAAATCACATTACG
>site_155
TCGTGATATTGCTCACGCCAAA
>site_156
TTCTAATAGCCATCACAAAACG
>site_157
TTGTGGATAAAATCACGGTCTG
>site_158
CTCTGAGATGGATCAAAGAATT
>site_159
CTTAGAAACCGATCACATACAG
>site_160
AATCGATTGCGTTCACGTTTAC
>site_161
TATTGATTTAAATCAAAGATTC
>site_162
AATTGAACCAAATCATAAAATC
>site_163
ATTGAACCCCGATCACACCATA
>site_164
TAATGAAAAGGATGACATATTC
>site_165
ACTTGCGTGACTACACATTCTT
>site_166
AGCAGATACAACTCACACAATG
>site_167
CTGTGCTGCGCATAATACTTTG
>site_168
CCATGCTCAATCTCACAAAGTG
>site_169
ATTCGACAAAGCGCACAATCCG
>site_170
ACAGGAAGCACATCACAAAGAC
>site_171
ATTTGCCACAGGTAACAAAAAA
>site_172
TACGGATCTTCATCACATAAAA
>site_173
CTGTGACAAGCTCCGCAAATCG
>site_174
CAACGCTTTGGCTCACAGTTTA
>site_175
ACAAAACATATGTCACAATATT
>site_176
ATATGATCTATATCAATTTCTC
>site_177
CTGTTGATATGATCACGTTATA
>site_178
TTTAGATGTAAATCACTCCATT
>site_179
ATGTGAAATAAAACAATTATTT
>site_180
ACCTGTCACAAATCACAAAAAG
>site_181
TAGTGCTCAGCGACACTATTTT
>site_182
TTCTTATCTACCTCACAAAGGT
>site_183
CTGTGCGCGCAACGACATTTTG
>site_184
TTACAAAATTGTTAACAATTTT
>site_185
ATTTTAACAACTTGACATATAT
>site_186
CTTCGTAACGCCTCGCAAATTT
>site_187
AACCTCTTTGCGTCACATTTTT
>site_188
TTTTGTAACAATTCAAACTTCT
>site_189
TCAGGCGTTAAATCACGTTTTC
>site_190
TTCATCTCTATGTCACATTTTG
>site_191
TTGTTACCTGCCTCTAACTTTG
>site_192
ATGTGATATTGCTCTCCTATGG
>site_193
ACGTTAACTGAAACGCATATTT
>site_194
TATTGATGTAAATCAAATTCAC
>site_195
CCATGAAACGGAACACGAAAAT
>site_196
ATAATAATCTAATCACATCTTG
>site_197
TGGTGCGCATGATAACGCCTTT
>site_198
GTGCAGGCTTGATCACAACTCC
>site_199
AGGTAATTCGAATGACATTGCT
>site_200
CTGGGATGAAAGTGACATTTGA
>site_201
CCGACGAATAGATCACAATTTA
>site_202
ATTAGTAAGTTATCACCATTTG
>site_203
CTGTGATAGTGTCATCATTTTC
>site_204
GCTTAATTTAAATAACAAAATC
>site_205
ATGTGATGAGAAAGTCAATTTG
>site_206
TGACGCATGAAATCACGTTTCA
>site_207
ATGCAAAATCAAAAACAATTTC
>site_208
AATCGATTTAACACACCATTTA
>site_209
TTGTAAACAGATTAACACCTCG
>site_210
CAGTTATTTTTAACAAATTTTT
>site_211
TGTTGCTGACCTTCAAAAATTA
>site_212
TTGTCATCTTTCTGACACCTTA
>site_213
AAGTTCGATATTTCTCGTTTTT
>site_214
CTGGAACGCTTTTCGCATTCTG
>site_215
ACCCGCTTTAAAACACGCTATC
>site_216
GTTTGACATTGTTCTCTCACTT
>site_217
CCTCGGTTTAGTTCACAGAAGC
>site_218
TAGTTACATGTTTAACACTTGA
>site_219
ATCTGGGTAGCATCACAGCAGA
>site_220
AGGCGACCTGGGTCATGCTGAA
>site_221
ATCTTGAAATAATCACATTGAT
>site_222
ATTGTTATCCGCTCACAATTCC
>site_223
TGTGGAAATTAATCCCACTATT
>site_224
CTGCATATTAATTGACATTTCT
>site_225
CGGGTATTAGCACCACATATAA
>site_226
ATGTAATAAAATTCATGGTAAT
>site_227
TTTTACTTTTGGTTACATATTT
>site_228
TCTTTATCTTTGTAGCACTTTC
>site_229
ACGCGCACTATGTCAACTCTTG
>site_230
CAATGAAAAATTGCACAGTAAA
>site_231
GTTAAATTGATGTAACATAATC
>site_232
TTGAGTCATAAATAACCTTTAG
>site_233
AGGTGAATCGCGCCAGCAAATT
>site_234
CTGAGACTAGTACGACTTTTTG
>site_235
AGTTGTAACTATGCACAAATGT
>site_236
CCCCATGGCAGATGACATTTTT
>site_237
AAAATATCCTTGTCACATTCGT
>site_238
ATGTAAATTGGTCAACCATTGT
>site_239
ACACTATGAGCAAAACACATTT
>site_240
ATTTAATCATGTTTACAGTAAT
>site_241
CTGGGAGCAGGCTCGATTTATG
>site_242
ACATGATAAATTTGACGAAGAA
>site_243
CAGTGAACCCCTTCCCAACCAC
>site_244
GAATGCTAATCATCAGAAATGT
>site_245
TTTGGGTTGTTATCAAATCGTT
>site_246
TGTAAATCTGCATCGGAATTTG
>site_247
TTCATACCACCATCACAACCAC
>site_248
TATTTAACGCCGTCAGAAATGT
>site_249
AAGGTGACTATACCACACTCAT
>site_250
TTAGCAAATACCTCACAGTGAA
>site_251
CTGCAACCATCTACAAATAACC
>site_252
CGGGTAATAACAACACTCATAT
>site_253
TTTCCTGAAAATTCACGCTGTA
>site_254
ATTTAATGAAGAGAATTTTTTT
>site_255
CTGCGTGAAGCAGCAGTAAATC
>site_256
ACAGGCACCTGATAAAGCCATT
>site_257
GGCAAGTGGTATTCGCACTTTT
>site_258
GTACGTTTGCAGTGAAATAACT
>site_259
ATAACAAAATCCTAATGTTATT
;
; Matrix parameters
;	Number of sites              	260
;	Columns                      	22
;	Rows                         	4
;	Alphabet                     	A|C|G|T
;	Prior                        	A:0.291144263562772|C:0.207810681831126|G:0.204024081631615|T:0.297020972974487|a:0.291144263562772|c:0.207810681831126|g:0.204024081631615|t:0.297020972974487
;	program                      	transfac
;	matrix.nb                    	1
;	accession                    	CRP.RegulonDB2012
;	AC                           	CRP.RegulonDB2012
;	id                           	CRP.RegulonDB2012
;	name                         	CRP.RegulonDB2012
;	description                  	wtGtGatcyrsaTCACahwttt
;	statistical_basis            	260 sequences
;	sites                        	260
;	nb_sites                     	260
;	min.prior                    	0.204024
;	alphabet.size                	4
;	max.bits                     	2
;	total.information            	7.08969
;	information.per.column       	0.322259
;	max.possible.info.per.col    	1.58952
;	consensus.strict             	atGtGatccagaTCACattttt
;	consensus.strict.rc          	AAAAATGTGATCTGGATCACAT
;	consensus.IUPAC              	wtGtGatcyrsaTCACahwttt
;	consensus.IUPAC.rc           	AAAWDTGTGATSYRGATCACAW
;	consensus.regexp             	[at]tGtGatc[ct][ag][cg]aTCACa[act][at]ttt
;	consensus.regexp.rc          	AAA[AT][AGT]TGTGAT[CG][CT][AG]GATCACA[AT]
;	residues.content.crude.freq  	A:0.3059|C:0.2065|G:0.1629|T:0.3247
;	G+C.content.crude.freq       	0.369406
;	residues.content.corrected.freq	A:0.3059|C:0.2065|G:0.1631|T:0.3245
;	G+C.content.corrected.freq   	0.369568
;	min(P(S|M))                  	2.2426e-28
;	max(P(S|M))                  	1.77642e-06
;	proba_range                  	1.77642e-06
;	Wmin                         	-30.7
;	Wmax                         	16
;	Wrange                       	46.7
; logo file:/space23/rsat/public_html/tmp/apache/2018/03/21/matrix-quality_2018-03-21.175002_zdBRpm/CRP.RegulonDB2012//matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_logo_m1.png
; logo file:/space23/rsat/public_html/tmp/apache/2018/03/21/matrix-quality_2018-03-21.175002_zdBRpm/CRP.RegulonDB2012//matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_logo_m1_rc.png
;
; Host name	sinik
; Job started	2018-03-21.175013
; Job done	2018-03-21.175013
; Seconds	0.42
;	user	0.42
;	system	0.04
;	cuser	0.42
;	csystem	0.05

Result files

Output directory .
matrix_log matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_log.txt
matrix_tab matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_matrix.tab
matrix_transfac matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_matrix.tf
matrix_info matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_matrix_info.txt
matrix_logo_png matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_logo_m1.png
matrix_logo_rc_png matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_logo_m1_rc.png
matrix_sites matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_matrix_sites.fasta
perm_col_matrices_LexA_peaks_1perm matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_LexA_peaks_matrix_perm_col_all_1.tab
perm_col_matrices_CRP_binding_sites_1perm matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_CRP_binding_sites_matrix_perm_col_all_1.tab
matrix_theoretical_distrib matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_theor_score_distrib.tab
empirical_distrib_matrix_sites matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_scan_matrix_sites_score_distrib.tab
empirical_distrib_LexA_peaks matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_scan_LexA_peaks_score_distrib.tab
LexA_peaks_1perm matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_scan_LexA_peaks_1perm_score_distrib.tab
empirical_distrib_CRP_binding_sites matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_scan_CRP_binding_sites_score_distrib.tab
CRP_binding_sites_1perm matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_scan_CRP_binding_sites_1perm_score_distrib.tab
distrib_nwdCRP_binding_sites matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_score_distrib_CRP_binding_sites_nwd.tab
distrib_nwdLexA_peaks matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_score_distrib_LexA_peaks_nwd.tab
matrix_nwd_table matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_nwd_CRP.RegulonDB2012_compare-scores.tab
zip_archive matrix-quality_2018-03-21.175002_CRP.RegulonDB2012_dir.zip