RSAT - get-orthologs

Get homologs (orthologs and others) in given taxon for a list of query genes. Specific parameters enable to return bidirectional best-hits, used as rough proxy for orthologs.
Program developed by Rekin's Janky and Jacques van Helden).

Phylogenetic tools are not supported on this instance of RSAT.

Our tools for phylogenetic footprinting (footprint-discovery, footprint-scan) are particularly well suited for microbial genomes (small genomes, many species available), but give poor results with multicellular organisms.

Phylogenetic approaches are currently supported on the following RSAT servers:

  1. Prokaryotes: http://prokaryotes.rsat.eu/
  2. Fungi: http://fungi.rsat.eu/